Cesar Valades-Cruz

Research

Advanced microscopy and image analysis for quantitative cell biology.

Research at the Institute of Hydrobiology: cyanobacteria, microscopy and image analysis

I develop microscopy and image analysis methods to study cell organization across scales. Explore the three areas below for an overview of the questions, methods, and projects.

01 / CURRENT FOCUS

Cyanobacterial cell division

Segmentation and tracking of individual cells and filaments to study growth, division, and differentiation.

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02 / IMAGING METHODS

Polarization & super-resolution

Measuring molecular orientation and nanoscale structure using polarized super-resolution microscopy.

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03 / COMPUTATIONAL TOOLS

3D live-cell image analysis

Navigation, tracking, restoration, and data workflows for complex microscopy datasets.

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My current work at the Institute of Hydrobiology centers on cyanobacterial cell division. Collaborations in polarization imaging and computational microscopy extend these methods to molecular organization and live-cell data.

Funding & collaborations

Funded research projects

Selected projects and programs in which I participate. See the CV for the full record.

NSFC Research Fund for International Excellent Young Scientists

Leader

Applications of Biophotonics and Image Processing in Microbiology · W2632090

CAS Class B Strategic Priority Research Program

Subtask leader

High-throughput screening technologies for endosymbiosis.

NSFC Key Project

Participant

Three-dimensional regulation of cell division in multicellular cyanobacteria · 32330003

NSFC Special Project

Participant

Establishing cell function editing technology based on endosymbiosis · 32350028

ANR LabEx Cell(n)Scale · PoMIMO

Participant

Polarization microscopy for imaging of membrane organization.

Inria Project Lab · NAVISCOPE

Participant

Image-guided navigation and visualization of large live-cell microscopy datasets.

ANR · DALLISH

Participant

Data assimilation and lattice light-sheet imaging for endocytosis and exocytosis modeling.